Autoresearch v2 Structure Viewer Audit

Audit Summary

Check	Result
Study views scanned	18
PDB structure references scanned	91
Missing referenced PDB files	0
Chain ID convention	All referenced PDBs use chain A and chain B only. The viewer styles chain A as target and chain B as generated binder.
Duplicate PDB files	2 duplicate-file groups, both within the same CD45 archived tree and reused by sibling nodes. No duplicate PDB hash was found across different targets in the sampled archive check.
Structure-less study views	12 archived study views have no PDB structure references, so no target/binder viewer is available there.

Target	Target chain A residue count	Chain A sequence hash	Binder chain B residue counts observed	Conclusion
`05_CD45`	88	`63552fd704`	82, 100, 103, 107, 108, 109, 126, 130, 131, 147, 163, 169, 184, 191	Matches CD45 target length in the reports.
`23_BetV1`	159	`d36f3a6995`	72, 90, 93, 98, 116, 123, 174, 181	Matches BetV1 target length in the reports.
`27_HER2_AAV`	237	`02e1677cbb`	62, 87, 88	Distinct HER2_AAV chain A sequence; report target description lacks a residue-count field.
`30_SC2RBD`	194	`b335344177`	82, 108, 120	Matches SC2RBD target length in the reports.

Run	Target	PDB refs	Chain A check	Notes
`selfhost_qwen36_05_CD45_20260420_122615_7179326`	05_CD45	8	All sampled PDBs have chain A=88, chain B generated binder.	Presentation-best CD45 source includes node `db45199f978b`.
`selfhost_qwen36_05_CD45_20260424_113757_7323363`	05_CD45	38	All sampled PDBs have chain A=88, chain B generated binder.	Tree metrics include a presentation overlay; use `summary.html` for per-node success counts.
`selfhost_qwen36_23_BetV1_20260421_195532_7228133`	23_BetV1	8	All sampled PDBs have chain A=159, chain B generated binder.
`selfhost_qwen36_23_BetV1_20260424_113757_7323365`	23_BetV1	27	All sampled PDBs have chain A=159, chain B generated binder.
`selfhost_qwen36_27_HER2_AAV_20260421_195532_7228134`	27_HER2_AAV	4	All sampled PDBs have chain A=237, chain B generated binder.
`selfhost_qwen36_30_SC2RBD_20260424_113757_7323364`	30_SC2RBD	6	All sampled PDBs have chain A=194, chain B generated binder.	All shown examples are failed/near-miss complexes.